EIDORS: Electrical Impedance Tomography and Diffuse Optical Tomography Reconstruction Software

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EIDORS-3D: Programming / Structure

• htdocs
  Comment: Documentation for Home page
• eidors3d
  Comment: Project software directory
  • algorithms
    Comment: Image reconstruction algoriths
    • algorithms/aa_1996
      Comment: Algorithms from paper:
      A. Adler, R. Guardo "Electrical Impedance Tomography: Regularised Imaging and Contrast Detection", IEEE Trans. Medical Imaging, 15:170-179, 1996.
    • algorithms/mv_2001
      Comment: Algorithms from paper:
      M. Vauhkonen, W.R.B. Lionheart, L.M. Heikkinen, P.J. Vauhkonen, and J.P. Kaipio, "A MATLAB package for the EIDORS project to reconstruct two-dimensional EIT images", Physiol Meas, 22 107-111, 2001.
    • algorithms/np_2003
      Comment: Algorithms from paper:
      Nick Polydorides and William R B Lionheart, "A Matlab toolkit for three-dimensional electrical impedance tomography: a contribution to the Electrical Impedance and Diffuse Optical Reconstruction Software project", Meas. Sci. Technol. 13:12 (December 2002) 1871-1883
    • algorithms/aa_2005
      Comment: New code written by Andy Adler while developing EIDORS
    • algorithms/ms_2005
      Comment: EIT algorithms by Manuch Soleimani
    • algorithms/ab_2005
      Comment: EIT algorithms by Andrea Borsic. Code contributed courtesy of Scientific Computing and Applied Inverse Problems
    • algorithms/ds_2005
      Comment: EIT algorithms by David Stephenson
  • examples
    Comment: Example and demo software
  • graphics_matlab
    Comment: Display graphics in Matlab
  • graphics_vtk
    Comment: Display graphics for VTK tool
  • meshing
    Comment: Code to interface with FEM meshing algorithms
    • meshing/netgen
      Comment: Code to interface with Netgen FEM meshing algorithms
      • meshing/netgen/ElectrodeInfo
        Comment:
  • models
    Comment: Code to build FEM models (either via software or preloaded)
    • models/aa_1996
      Comment: Models from paper:
      A. Adler, R. Guardo "Electrical Impedance Tomography: Regularised Imaging and Contrast Detection", IEEE Trans. Medical Imaging, 15:170-179, 1996.
    • models/mv_2001
      Comment: Models from paper:
      M. Vauhkonen, W.R.B. Lionheart, L.M. Heikkinen, P.J. Vauhkonen, and J.P. Kaipio, "A MATLAB package for the EIDORS project to reconstruct two-dimensional EIT images", Physiol Meas, 22 107-111, 2001.
    • models/sm_2005
      Comment: FEM models and software by Stephen Murphy, U. Manchester
    • models/ds_2005
      Comment: FEM models and software by David Stephenson, U. Manchester
  • sample_data
    Comment: Contributed simulation and measured sample data
  • tests
    Comment: Tests to validate code correctness